Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318671 bp
Thymine Count
1315240 bp
Guanine Count
1349022 bp
Cytosine Count
1330036 bp
Genome Length
5324044 bp
Protein-coding Genes
4759 genes
Non-Coding Genes
532 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication regulatory protein repa2 | C9029_27050 | Not Available | Positive | 5255241 - 5255495 | 9438.51 |
| replication protein repa | C9029_27055 | Not Available | Negative | 5255539 - 5255652 | 4136.05 |
| positive regulator of repfic repa1 expression | C9029_27060 | Not Available | Positive | 5255734 - 5255808 | 2699.38 |
| incfii family plasmid replication initiator repa | C9029_27065 | Not Available | Positive | 5255801 - 5256658 | 32788.6 |
| hypothetical protein | C9029_27075 | Not Available | Negative | 5257253 - 5257510 | 9196.22 |
| duf1778 domain-containing protein | C9029_27080 | Not Available | Positive | 5257577 - 5257861 | 10948.2 |
| gnat family n-acetyltransferase | C9029_27085 | Not Available | Positive | 5257849 - 5258337 | 17648.5 |
| helix-turn-helix domain-containing protein | C9029_27090 | Not Available | Negative | 5258635 - 5259351 | 27787.7 |
| eal domain-containing protein | C9029_27095 | Not Available | Positive | 5259588 - 5260250 | 25384.9 |
| type ii toxin-antitoxin system rele/pare family toxin | C9029_27105 | Not Available | Positive | 5260839 - 5261117 | 10679.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





