Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318671 bp
Thymine Count
1315240 bp
Guanine Count
1349022 bp
Cytosine Count
1330036 bp
Genome Length
5324044 bp
Protein-coding Genes
4759 genes
Non-Coding Genes
532 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail protein | C9029_26085 | Not Available | Negative | 5103935 - 5104105 | 6028.94 |
| hypothetical protein | C9029_26090 | Not Available | Negative | 5104106 - 5106278 | 79484.3 |
| type vi secretion system tip protein vgrg | C9029_26095 | Not Available | Negative | 5106354 - 5108495 | 79794.1 |
| hcp family type vi secretion system effector | C9029_26100 | Not Available | Negative | 5108705 - 5109223 | 19256.8 |
| dna repair protein radc | C9029_26105 | Not Available | Positive | 5109509 - 5109703 | 6794.15 |
| duf987 domain-containing protein | C9029_26110 | Not Available | Positive | 5109772 - 5109993 | 8409.23 |
| type iv toxin-antitoxin system yeeu family antitoxin | C9029_26115 | Not Available | Positive | 5110067 - 5110435 | 13626.3 |
| hypothetical protein | C9029_26125 | Not Available | Positive | 5110897 - 5111385 | 18107.5 |
| duf957 domain-containing protein | C9029_26130 | Not Available | Positive | 5111402 - 5111746 | 12467.9 |
| duf1076 domain-containing protein | C9029_26135 | Not Available | Negative | 5112119 - 5112757 | 23952.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





