Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318671 bp
Thymine Count
1315240 bp
Guanine Count
1349022 bp
Cytosine Count
1330036 bp
Genome Length
5324044 bp
Protein-coding Genes
4759 genes
Non-Coding Genes
532 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shiga toxin stx2 subunit b | C9029_25220 | Not Available | Positive | 4977672 - 4977935 | 9610.56 |
| hypothetical protein | C9029_25225 | Not Available | Negative | 4977986 - 4978189 | 7915.78 |
| Trna-thr | Not Available | Not Available | Positive | 4978449 - 4978524 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4978528 - 4978602 | Not Available |
| holin | C9029_25240 | Not Available | Positive | 4978895 - 4979110 | 7923.52 |
| lysozyme | C9029_25245 | Not Available | Positive | 4979110 - 4979461 | 12297.8 |
| transposase | C9029_25265 | Not Available | Negative | 4980143 - 4980553 | 15330.6 |
| type ii toxin-antitoxin system rele/pare family toxin | C9029_25275 | Not Available | Negative | 4980950 - 4981237 | 11176.8 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | C9029_25280 | Not Available | Negative | 4981234 - 4981485 | 9181.89 |
| parb/repb/spo0j family plasmid partition protein | C9029_25285 | Not Available | Negative | 4982007 - 4982978 | 35395.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





