Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318671 bp
Thymine Count
1315240 bp
Guanine Count
1349022 bp
Cytosine Count
1330036 bp
Genome Length
5324044 bp
Protein-coding Genes
4759 genes
Non-Coding Genes
532 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee export apparatus protein escv | C9029_23300 | Not Available | Positive | 4659291 - 4661318 | 75154.7 |
| type iii secretion system lee atpase escn | C9029_23305 | Not Available | Positive | 4661302 - 4662642 | 48879.3 |
| type iii secretion protein | C9029_23310 | Not Available | Positive | 4662702 - 4663022 | 12362.7 |
| duf1106 domain-containing protein | C9029_23315 | Not Available | Positive | 4663015 - 4663431 | 16348.6 |
| type iii secretion system protein sepq | C9029_23320 | Not Available | Positive | 4663394 - 4664311 | 34971.9 |
| secretion protein esph | C9029_23325 | Not Available | Positive | 4664342 - 4664857 | 19561.3 |
| tir chaperone family protein | C9029_23330 | Not Available | Negative | 4665075 - 4665434 | 13781.4 |
| t3ss effector protein map | C9029_23335 | Not Available | Positive | 4665685 - 4666296 | 22601.1 |
| translocated intimin receptor tir | C9029_23340 | Not Available | Positive | 4666743 - 4668359 | 55424.1 |
| type iii secretion system lee chaperone cest | C9029_23345 | Not Available | Positive | 4668492 - 4668962 | 17721.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





