Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318671 bp
Thymine Count
1315240 bp
Guanine Count
1349022 bp
Cytosine Count
1330036 bp
Genome Length
5324044 bp
Protein-coding Genes
4759 genes
Non-Coding Genes
532 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | C9029_22685 | Not Available | Negative | 4551633 - 4552169 | 20531.9 |
| type vi secretion system baseplate subunit tssf | C9029_22695 | Not Available | Negative | 4553192 - 4554952 | 67336.3 |
| hypothetical protein | C9029_22700 | Not Available | Negative | 4555028 - 4555432 | 14994.9 |
| hypothetical protein | C9029_22705 | Not Available | Negative | 4555512 - 4555934 | 15950.0 |
| paar domain-containing protein | C9029_22710 | Not Available | Negative | 4555927 - 4557345 | 52287.6 |
| type vi secretion system protein tssa | C9029_22715 | Not Available | Negative | 4557351 - 4558961 | 60155.3 |
| type vi secretion protein vask | C9029_22720 | Not Available | Negative | 4558954 - 4562280 | 124011.0 |
| hypothetical protein | C9029_22725 | Not Available | Negative | 4562337 - 4563551 | 44697.9 |
| hypothetical protein | C9029_22730 | Not Available | Negative | 4563629 - 4564111 | 18094.7 |
| type vi secretion system tip protein vgrg | C9029_22740 | Not Available | Negative | 4564797 - 4567304 | 92699.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





