Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318671 bp
Thymine Count
1315240 bp
Guanine Count
1349022 bp
Cytosine Count
1330036 bp
Genome Length
5324044 bp
Protein-coding Genes
4759 genes
Non-Coding Genes
532 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | C9029_22210 | Not Available | Positive | 4454980 - 4456044 | 39250.4 |
| deoxyribonuclease v | C9029_22215 | Not Available | Positive | 4456054 - 4456725 | 24631.9 |
| duf416 family protein | C9029_22220 | Not Available | Positive | 4456768 - 4457358 | 22613.9 |
| dna-binding protein hu-alpha | C9029_22225 | Not Available | Positive | 4457545 - 4457817 | 9535.51 |
| duf1481 domain-containing protein | C9029_22230 | Not Available | Positive | 4457830 - 4458525 | 26352.9 |
| zinc resistance-associated protein | C9029_22235 | Not Available | Negative | 4458527 - 4458952 | 15230.3 |
| two-component system sensor histidine kinase zras | C9029_22240 | Not Available | Positive | 4459190 - 4460566 | 50520.1 |
| sigma-54-dependent response regulator transcription factor zrar | C9029_22245 | Not Available | Positive | 4460563 - 4461888 | 48375.3 |
| phosphoribosylamine--glycine ligase | C9029_22250 | Not Available | Negative | 4461885 - 4463174 | 45971.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | C9029_22255 | Not Available | Negative | 4463186 - 4464775 | 57361.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





