Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318671 bp
Thymine Count
1315240 bp
Guanine Count
1349022 bp
Cytosine Count
1330036 bp
Genome Length
5324044 bp
Protein-coding Genes
4759 genes
Non-Coding Genes
532 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase phoq | C9029_19155 | Not Available | Negative | 3837476 - 3838936 | 55336.8 |
| two-component system response regulator phop | C9029_19160 | Not Available | Negative | 3838936 - 3839607 | 25518.7 |
| adenylosuccinate lyase | C9029_19165 | Not Available | Negative | 3839775 - 3841145 | 51600.8 |
| lysogenization regulator hfld | C9029_19170 | Not Available | Negative | 3841149 - 3841790 | 22949.0 |
| trna 2-thiouridine(34) synthase mnma | C9029_19175 | Not Available | Negative | 3841826 - 3842932 | 40961.7 |
| isocitrate dehydrogenase | C9029_19465 | Not Available | Positive | 3885123 - 3885287 | 6049.49 |
| gtpase family protein | C9029_19470 | Not Available | Positive | 3885434 - 3885505 | 2520.87 |
| autotransporter adhesin ag43 | C9029_19475 | Not Available | Positive | 3885853 - 3888972 | 106633.0 |
| hypothetical protein | C9029_19485 | Not Available | Positive | 3891685 - 3892140 | 16902.1 |
| duf905 domain-containing protein | C9029_19490 | Not Available | Positive | 3892219 - 3892452 | 8751.36 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





