Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318671 bp
Thymine Count
1315240 bp
Guanine Count
1349022 bp
Cytosine Count
1330036 bp
Genome Length
5324044 bp
Protein-coding Genes
4759 genes
Non-Coding Genes
532 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosol nonspecific dipeptidase | C9029_18020 | Not Available | Positive | 3611822 - 3613279 | 52980.6 |
| peptide chain release factor h | C9029_18025 | Not Available | Negative | 3613336 - 3613950 | 22910.2 |
| rna ligase rtcb family protein | C9029_18030 | Not Available | Negative | 3613947 - 3615113 | 42560.9 |
| gnat family n-acetyltransferase | C9029_18035 | Not Available | Negative | 3615332 - 3615784 | 17561.2 |
| dna polymerase iv | C9029_18040 | Not Available | Negative | 3615781 - 3616836 | 39491.2 |
| putative lateral flagellar export/assembly protein lafu | C9029_18045 | Not Available | Negative | 3616907 - 3617677 | 28386.2 |
| flagellar type iii secretion system protein flha | C9029_18050 | Not Available | Positive | 3617637 - 3619376 | 63192.2 |
| type ii toxin-antitoxin system hica family toxin | C9029_18055 | Not Available | Positive | 3619481 - 3619759 | 10187.3 |
| type ii toxin-antitoxin system hicb family antitoxin | C9029_18060 | Not Available | Positive | 3619752 - 3620108 | 13400.8 |
| peptidoglycan endopeptidase | C9029_18065 | Not Available | Negative | 3620165 - 3620938 | 29736.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





