Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318671 bp
Thymine Count
1315240 bp
Guanine Count
1349022 bp
Cytosine Count
1330036 bp
Genome Length
5324044 bp
Protein-coding Genes
4759 genes
Non-Coding Genes
532 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | C9029_17310 | Not Available | Negative | 3479237 - 3480691 | 52681.4 |
| xylose isomerase | C9029_17315 | Not Available | Negative | 3480763 - 3482085 | 49721.7 |
| d-xylose abc transporter substrate-binding protein | C9029_17320 | Not Available | Positive | 3482451 - 3483443 | 35748.2 |
| d-xylose abc transporter atp-binding protein | C9029_17325 | Not Available | Positive | 3483521 - 3485062 | 56459.9 |
| xylose abc transporter permease | C9029_17330 | Not Available | Positive | 3485040 - 3486221 | 41033.5 |
| xylr family transcriptional regulator | C9029_17335 | Not Available | Positive | 3486299 - 3487477 | 44871.7 |
| protein bax | C9029_17340 | Not Available | Negative | 3487585 - 3488409 | 30869.3 |
| alpha-amylase | C9029_17345 | Not Available | Positive | 3488729 - 3490759 | 75761.6 |
| valine--pyruvate transaminase | C9029_17350 | Not Available | Positive | 3490937 - 3492190 | 46689.9 |
| 4fe-4s dicluster domain-containing protein | C9029_17355 | Not Available | Negative | 3492342 - 3492815 | 17434.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





