Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0242 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318671 bp
Thymine Count
1315240 bp
Guanine Count
1349022 bp
Cytosine Count
1330036 bp
Genome Length
5324044 bp
Protein-coding Genes
4759 genes
Non-Coding Genes
532 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2713 family protein | C9029_14650 | Not Available | Positive | 2980703 - 2981410 | 26570.1 |
| pp_02890 | C9029_14655 | Not Available | Positive | 2981773 - 2981895 | Not Available |
| hydrogenase-2 operon protein hybg | C9029_15005 | Not Available | Negative | 3027428 - 3027676 | 8808.67 |
| hydrogenase nickel incorporation protein hybf | C9029_15010 | Not Available | Negative | 3027689 - 3028030 | 12698.1 |
| hydrogenase-2 assembly chaperone | C9029_15015 | Not Available | Negative | 3028023 - 3028511 | 17990.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | C9029_15020 | Not Available | Negative | 3028504 - 3028998 | 17724.8 |
| hydrogenase-2 large chain | C9029_15025 | Not Available | Negative | 3028998 - 3030701 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | C9029_15030 | Not Available | Negative | 3030698 - 3031876 | 43604.7 |
| hydrogenase-2 operon protein hyba | C9029_15035 | Not Available | Negative | 3031866 - 3032852 | 36005.0 |
| hydrogenase-2 small chain | C9029_15040 | Not Available | Negative | 3032855 - 3033973 | 39654.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





