Escherichia coli strain FWSEC0239

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0239 is a gram-negative, rod-shaped bacterium that is facultatively anaerobic and capable of mobility, possessing flagella. This strain is primarily associated with a variety of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and many others, indicating a broad ecological niche within both vertebrates and invertebrates. The optimal growth temperature for FWSEC0239 is 37°C, situating it within the mesophilic temperature range. It has a unique biotic relationship as a free-living organism, which allows it to thrive in diverse environments associated with its various hosts. FWSEC0239 is notably pathogenic in humans, associated with numerous health effects, including urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and even severe conditions such as hemolytic uremic syndrome (HUS). The strain's capacity to cause such a wide range of diseases may be attributed to its adaptability and ability to colonize different host environments. Given its association with both human and animal hosts, as well as its role in various health conditions, FWSEC0239 highlights the complex interactions between microbial pathogens and their hosts. This strain exemplifies the importance of understanding pathogenic E. coli in both clinical and ecological contexts, as it can have profound implications for public health and animal husbandry.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0239

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0239
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0239 plasmid unnamed3

Gene Summary

Adenine Count

1324849 bp

Thymine Count

1312595 bp

Guanine Count

1332972 bp

Cytosine Count

1348915 bp

Genome Length

5329121 bp

Protein-coding Genes

4685 genes

Non-Coding Genes

621 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer protein trauC9026_27005Not AvailableNegative5250044 - 525103636637.4
protein trawC9026_27010Not AvailableNegative5251033 - 525166523631.7
type-f conjugative transfer system protein trbiC9026_27015Not AvailableNegative5251662 - 525204814222.0
type iv secretion system protein tracC9026_27020Not AvailableNegative5252045 - 525467299185.2
protein trarC9026_27025Not AvailableNegative5254832 - 52550538313.95
type iv conjugative transfer system protein travC9026_27030Not AvailableNegative5255188 - 525570318490.3
duf2689 domain-containing proteinC9026_27035Not AvailableNegative5255703 - 525606813034.9
conjugal transfer protein trapC9026_27040Not AvailableNegative5256007 - 525659421910.7
conjugal transfer protein trabC9026_27045Not AvailableNegative5256584 - 525801150420.8
type-f conjugative transfer system secretin trakC9026_27050Not AvailableNegative5258011 - 525868223541.0

Displaying genes 5231 – 5240 of 5310 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total