Escherichia coli strain FWSEC0236

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0236 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic lifestyle. It is characterized by its mobility, attributed to the presence of flagella, and typically arranges itself in pairs or as singles. This strain is mesophilic, with an optimal growth temperature of 37°C. FWSEC0236 is associated with a variety of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and numerous other vertebrates and invertebrates, such as Acanthamoeba castellanii and various species within Mammalia and Aves. Its free-living biotic relationship suggests that it can thrive independently in diverse environments, particularly those associated with its hosts. This strain is known to be pathogenic to humans, causing a range of health issues including urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and more severe conditions such as hemolytic uremic syndrome (HUS) and septicemia. The extensive list of health effects highlights its significant role in both community- and nosocomial-acquired infections. The diverse array of hosts and the strain's pathogenic potential underscore its ecological importance. In particular, its ability to cause various infections in both humans and animals suggests that E. coli FWSEC0236 may play a critical role in the dynamics of host-associated microbiomes and pathogen transmission, which can impact both public health and veterinary medicine. Understanding such strains is vital for developing effective control and prevention strategies against E. coli-related diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0236

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0236
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0236 plasmid unnamed2

Gene Summary

Adenine Count

1318229 bp

Thymine Count

1316711 bp

Guanine Count

1330090 bp

Cytosine Count

1349854 bp

Genome Length

5324694 bp

Protein-coding Genes

4686 genes

Non-Coding Genes

602 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC9023_00970Not AvailableNegative219660 - 22000412525.9
bcr/cfla family multidrug efflux mfs transporterC9023_00975Not AvailableNegative220337 - 22152743341.4
16s rrna pseudouridine(516) synthase rsuaC9023_00980Not AvailableNegative221555 - 22225025866.8
dead/deah box helicaseC9023_00985Not AvailablePositive222399 - 22415966546.0
50s ribosomal protein l25C9023_00990Not AvailablePositive224284 - 22456810694.0
nucleoid-associated protein yejkC9023_00995Not AvailableNegative224707 - 22571437825.6
duf1414 domain-containing proteinC9023_01000Not AvailablePositive225896 - 2261238288.95
cardiolipin transport protein pbgaC9023_01005Not AvailablePositive226143 - 22790367285.8
Trna-proNot AvailableNot AvailablePositive227978 - 228054Not Available
nitrate/nitrite response regulator protein narpC9023_01020Not AvailablePositive231069 - 23171623636.5

Displaying genes 851 – 860 of 5291 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total