Escherichia coli strain FWSEC0236

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0236 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic lifestyle. It is characterized by its mobility, attributed to the presence of flagella, and typically arranges itself in pairs or as singles. This strain is mesophilic, with an optimal growth temperature of 37°C. FWSEC0236 is associated with a variety of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and numerous other vertebrates and invertebrates, such as Acanthamoeba castellanii and various species within Mammalia and Aves. Its free-living biotic relationship suggests that it can thrive independently in diverse environments, particularly those associated with its hosts. This strain is known to be pathogenic to humans, causing a range of health issues including urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and more severe conditions such as hemolytic uremic syndrome (HUS) and septicemia. The extensive list of health effects highlights its significant role in both community- and nosocomial-acquired infections. The diverse array of hosts and the strain's pathogenic potential underscore its ecological importance. In particular, its ability to cause various infections in both humans and animals suggests that E. coli FWSEC0236 may play a critical role in the dynamics of host-associated microbiomes and pathogen transmission, which can impact both public health and veterinary medicine. Understanding such strains is vital for developing effective control and prevention strategies against E. coli-related diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0236

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0236
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0236 plasmid unnamed2

Gene Summary

Adenine Count

1318229 bp

Thymine Count

1316711 bp

Guanine Count

1330090 bp

Cytosine Count

1349854 bp

Genome Length

5324694 bp

Protein-coding Genes

4686 genes

Non-Coding Genes

602 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps export abc transporter periplasmic protein lptcC9023_07305Not AvailablePositive1528564 - 152913921703.8
lipopolysaccharide abc transporter substrate-binding protein lptaC9023_07310Not AvailablePositive1529108 - 152966520128.1
lipopolysaccharide abc transporter atp-binding proteinC9023_07315Not AvailablePositive1529672 - 153039726802.3
rna polymerase factor sigma-54C9023_07320Not AvailablePositive1530445 - 153187854054.9
ribosome hibernation promoting factorC9023_07325Not AvailablePositive1531901 - 153218810750.9
pts iia-like nitrogen regulatory protein ptsnC9023_07330Not AvailablePositive1532306 - 153279717960.6
rnase adaptor protein rapzC9023_07335Not AvailablePositive1532843 - 153369732494.2
phosphocarrier protein nprC9023_07340Not AvailablePositive1533694 - 15339669810.71
phop regulatory network protein yrblC9023_07345Not AvailablePositive1534180 - 153481224346.4
monofunctional biosynthetic peptidoglycan transglycosylaseC9023_07350Not AvailableNegative1534809 - 153553727343.1

Displaying genes 2071 – 2080 of 5291 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total