Escherichia coli strain FWSEC0235

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0235 is a Gram-negative, rod-shaped bacterium characterized by its mobility and presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions. It typically resides in host-associated environments, demonstrating a free-living biotic relationship with a diverse array of hosts including Homo sapiens, Gallus gallus, Bos taurus, and various other vertebrates and invertebrates. The optimal growth temperature for FWSEC0235 is 37°C, placing it in the mesophilic temperature range. It contains a single replicon and is surrounded by a double membrane, which is characteristic of Gram-negative bacteria. FWSEC0235 is notably associated with a wide range of health effects, particularly in humans. It is implicated in various infections and diseases, including urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis, among others. The strain is capable of causing severe conditions such as hemolytic uremic syndrome (HUS) and septicemia, highlighting its pathogenic potential. Understanding the diverse pathogenicity of E. coli strain FWSEC0235 is crucial, as it underscores the bacterium's role in human health and disease. Its interactions with various hosts and the resultant health implications indicate the need for continued research on E. coli strains, particularly those with significant clinical relevance. This knowledge is vital for developing effective prevention and treatment strategies for infections linked to this strain.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0235

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0235
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0235 plasmid unnamed3

Gene Summary

Adenine Count

1319242 bp

Thymine Count

1313973 bp

Guanine Count

1346920 bp

Cytosine Count

1330211 bp

Genome Length

5320286 bp

Protein-coding Genes

4687 genes

Non-Coding Genes

618 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinC9022_02665Not AvailableNegative589265 - 58968115493.9
Hypothetical proteinC9022_02670Not AvailableNegative589678 - 5898877915.35
Hypothetical proteinC9022_02675Not AvailableNegative589880 - 59015510384.3
Hypothetical proteinC9022_02680Not AvailableNegative590152 - 59064017609.2
Gp38C9022_02685Not AvailableNegative590637 - 5908026273.74
Abc2C9022_02690Not AvailableNegative590813 - 59110911354.4
Hypothetical proteinC9022_02695Not AvailableNegative591133 - 59172021397.2
Hypothetical proteinC9022_02700Not AvailableNegative591717 - 59239725643.7
Hypothetical proteinC9022_02705Not AvailableNegative592406 - 5925947478.04
Kil proteinC9022_02710Not AvailableNegative592591 - 5927044442.47

Displaying genes 11 – 20 of 5307 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total