Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0235 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319242 bp
Thymine Count
1313973 bp
Guanine Count
1346920 bp
Cytosine Count
1330211 bp
Genome Length
5320286 bp
Protein-coding Genes
4687 genes
Non-Coding Genes
618 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter permease | C9022_21840 | Not Available | Negative | 4384522 - 4385544 | 37347.3 |
| abc transporter substrate-binding protein | C9022_21845 | Not Available | Negative | 4385546 - 4387105 | 58027.6 |
| d-alanyl-d-alanine dipeptidase | C9022_21850 | Not Available | Negative | 4387119 - 4387700 | 21228.2 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | C9022_21855 | Not Available | Negative | 4387958 - 4390357 | 90252.5 |
| diguanylate cyclase | C9022_21860 | Not Available | Negative | 4390382 - 4391764 | 53210.8 |
| glycoside hydrolase family 10 protein | C9022_21865 | Not Available | Negative | 4392141 - 4393460 | 49533.9 |
| glutamate:gamma-aminobutyrate antiporter | C9022_21870 | Not Available | Negative | 4393591 - 4395126 | 55080.0 |
| type iii secretion system effector arginine glycosyltransferase nleb2 | C9022_21875 | Not Available | Positive | 4395581 - 4396561 | 38047.2 |
| t3ss effector nlec domain protein | C9022_21880 | Not Available | Positive | 4396622 - 4396885 | 9535.27 |
| hypothetical protein | C9022_21885 | Not Available | Positive | 4396908 - 4397039 | 5106.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





