Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0235 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319242 bp
Thymine Count
1313973 bp
Guanine Count
1346920 bp
Cytosine Count
1330211 bp
Genome Length
5320286 bp
Protein-coding Genes
4687 genes
Non-Coding Genes
618 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9022_21570 | Not Available | Negative | 4323649 - 4324128 | 18160.9 |
| hypothetical protein | C9022_21575 | Not Available | Negative | 4324138 - 4324878 | 27391.7 |
| hcp family type vi secretion system effector | C9022_21580 | Not Available | Negative | 4325095 - 4325577 | 18076.6 |
| hypothetical protein | C9022_21585 | Not Available | Negative | 4325601 - 4326953 | 50685.3 |
| type vi secretion system membrane subunit tssm | C9022_21590 | Not Available | Negative | 4326964 - 4330398 | 130997.0 |
| type vi secretion system protein tssa | C9022_21595 | Not Available | Negative | 4330507 - 4331919 | 52362.2 |
| type vi secretion system-associated protein tago | C9022_21600 | Not Available | Negative | 4331924 - 4332667 | 26442.7 |
| type vi secretion system atpase tssh | C9022_21605 | Not Available | Negative | 4332664 - 4335429 | 101031.0 |
| dotu family type iv/vi secretion system protein | C9022_21610 | Not Available | Negative | 4335438 - 4336199 | 29360.7 |
| type vi secretion system lipoprotein tssj | C9022_21620 | Not Available | Negative | 4337537 - 4338061 | 19395.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





