Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0235 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319242 bp
Thymine Count
1313973 bp
Guanine Count
1346920 bp
Cytosine Count
1330211 bp
Genome Length
5320286 bp
Protein-coding Genes
4687 genes
Non-Coding Genes
618 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase csda | C9022_20625 | Not Available | Positive | 4117118 - 4118323 | 43278.6 |
| cysteine desulfurase sulfur acceptor subunit csde | C9022_20630 | Not Available | Positive | 4118323 - 4118766 | 15955.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | C9022_20635 | Not Available | Negative | 4118817 - 4119623 | 28563.6 |
| murein transglycosylase a | C9022_20640 | Not Available | Negative | 4119700 - 4120797 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 4121006 - 4121082 | Not Available |
| type vi secretion system contractile sheath small subunit | C9022_20650 | Not Available | Positive | 4121716 - 4122225 | 19230.1 |
| type vi secretion system contractile sheath large subunit | C9022_20655 | Not Available | Positive | 4122274 - 4123812 | 58006.7 |
| type vi secretion system baseplate subunit tssk | C9022_20660 | Not Available | Positive | 4123830 - 4125167 | 49603.7 |
| dotu family type iv/vi secretion system protein | C9022_20665 | Not Available | Positive | 4125164 - 4125829 | 25281.7 |
| ompa family protein | C9022_20670 | Not Available | Positive | 4125842 - 4127494 | 60484.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





