Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0235 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319242 bp
Thymine Count
1313973 bp
Guanine Count
1346920 bp
Cytosine Count
1330211 bp
Genome Length
5320286 bp
Protein-coding Genes
4687 genes
Non-Coding Genes
618 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine--trna ligase | C9022_20325 | Not Available | Positive | 4053785 - 4055185 | 52573.2 |
| porin ompf | C9022_20330 | Not Available | Positive | 4055787 - 4056875 | 39335.4 |
| aspartate aminotransferase | C9022_20335 | Not Available | Positive | 4057059 - 4058249 | 43575.7 |
| formate dehydrogenase accessory protein fdhe | C9022_20340 | Not Available | Negative | 4058644 - 4059573 | 34690.5 |
| formate dehydrogenase cytochrome b556(fdo) subunit | C9022_20345 | Not Available | Negative | 4059570 - 4060205 | 24607.7 |
| formate dehydrogenase-o iron-sulfur subunit | C9022_20350 | Not Available | Negative | 4060202 - 4061104 | 33102.1 |
| formate dehydrogenase-n subunit alpha | C9022_20355 | Not Available | Negative | 4061117 - 4064167 | 112446.0 |
| sulfurtransferase fdhd | C9022_20360 | Not Available | Positive | 4064361 - 4065194 | 30533.8 |
| duf3829 domain-containing protein | C9022_20365 | Not Available | Positive | 4065347 - 4066387 | 38696.6 |
| hth domain-containing protein | C9022_20370 | Not Available | Negative | 4066437 - 4068185 | 66067.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





