Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0235 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319242 bp
Thymine Count
1313973 bp
Guanine Count
1346920 bp
Cytosine Count
1330211 bp
Genome Length
5320286 bp
Protein-coding Genes
4687 genes
Non-Coding Genes
618 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system protein sepq | C9022_19715 | Not Available | Positive | 3928281 - 3929198 | 34971.9 |
| secretion protein esph | C9022_19720 | Not Available | Positive | 3929229 - 3929744 | 19561.3 |
| tir chaperone family protein | C9022_19725 | Not Available | Negative | 3929962 - 3930321 | 13781.4 |
| t3ss effector protein map | C9022_19730 | Not Available | Positive | 3930572 - 3931183 | 22601.1 |
| translocated intimin receptor tir | C9022_19735 | Not Available | Positive | 3931630 - 3933246 | 55424.1 |
| type iii secretion system lee chaperone cest | C9022_19740 | Not Available | Positive | 3933379 - 3933849 | 17721.9 |
| intimin | C9022_19745 | Not Available | Positive | 3933910 - 3936729 | 101692.0 |
| type iii secretion system lee inner membrane ring protein escd | C9022_19750 | Not Available | Negative | 3936944 - 3938164 | 45318.8 |
| tyea family type iii secretion system gatekeeper subunit | C9022_19755 | Not Available | Positive | 3938307 - 3939362 | 40041.9 |
| type iii secretion system lee translocon filament protein espa | C9022_19760 | Not Available | Positive | 3939420 - 3939998 | 20505.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





