Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0235 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319242 bp
Thymine Count
1313973 bp
Guanine Count
1346920 bp
Cytosine Count
1330211 bp
Genome Length
5320286 bp
Protein-coding Genes
4687 genes
Non-Coding Genes
618 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee outer membrane ring protein escc | C9022_19665 | Not Available | Negative | 3920308 - 3921846 | 56576.5 |
| sepd | C9022_19670 | Not Available | Negative | 3921846 - 3922301 | 17536.9 |
| type iii secretion system lee inner membrane ring protein escj | C9022_19675 | Not Available | Negative | 3922307 - 3922879 | 20906.2 |
| esci/ysci/hrpb family type iii secretion system inner rod protein | C9022_19680 | Not Available | Negative | 3922881 - 3923258 | 13383.9 |
| type iii secretion system protein sepz | C9022_19685 | Not Available | Negative | 3923342 - 3923644 | 9562.57 |
| type iii secretion system lee chaperone cesl | C9022_19690 | Not Available | Positive | 3923828 - 3924181 | 13910.8 |
| type iii secretion system lee export apparatus protein escv | C9022_19695 | Not Available | Positive | 3924178 - 3926205 | 75154.7 |
| type iii secretion system lee atpase escn | C9022_19700 | Not Available | Positive | 3926189 - 3927529 | 48879.3 |
| type iii secretion protein | C9022_19705 | Not Available | Positive | 3927589 - 3927909 | 12362.7 |
| duf1106 domain-containing protein | C9022_19710 | Not Available | Positive | 3927902 - 3928318 | 16348.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





