Escherichia coli strain FWSEC0159

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0159 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility due to the presence of flagella. This strain is primarily host-associated, indicating that it resides within various hosts, including Homo sapiens, Gallus gallus, and Bos taurus, among others. With an optimal growth temperature of 37°C, FWSEC0159 is classified as mesophilic, thriving in moderate temperature ranges. The strain has a single replicon and is characterized by a double membrane structure. Its free-living biotic relationship reflects its ability to exist independently within various environments, including those associated with its diverse array of hosts. Notably, this strain is associated with a wide range of health effects, particularly in humans, where it is linked to urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The presence of FWSEC0159 in various animal species and its pathogenic potential in humans underscore the ecological and health-related implications of this strain. Its role in both enteric and urinary tract diseases emphasizes the importance of monitoring E. coli strains, as they can significantly impact public health and animal welfare. The strain's adaptability to multiple hosts and its associated pathogenicity highlight the complexities of microbial interactions in ecological systems and the importance of understanding bacterial behavior in both clinical and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0159

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0159
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0159


Gene Summary

Adenine Count

1331386 bp

Thymine Count

1334285 bp

Guanine Count

1350909 bp

Cytosine Count

1346100 bp

Genome Length

5380485 bp

Protein-coding Genes

5131 genes

Non-Coding Genes

249 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-metNot AvailableNot AvailablePositive854650 - 854726Not Available
murein transglycosylase aC9009_04040Not AvailablePositive854935 - 85603240412.9
trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcdaC9009_04045Not AvailablePositive856109 - 85691528563.6
cysteine desulfurase sulfur acceptor subunit csdeC9009_04050Not AvailableNegative856966 - 85740915927.2
cysteine desulfurase csdaC9009_04055Not AvailableNegative857409 - 85861443306.7
ygdi/ygdr family lipoproteinC9009_04060Not AvailablePositive858806 - 8590338174.67
glycine cleavage system transcriptional activatorC9009_04065Not AvailablePositive859384 - 86030134403.4
duf423 domain-containing proteinC9009_04070Not AvailablePositive860320 - 86071514334.0
23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmmC9009_04075Not AvailablePositive860708 - 86180841889.4
l-fucose operon activatorC9009_04080Not AvailableNegative861852 - 86258327363.7

Displaying genes 981 – 990 of 5389 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total