Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0159 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1331386 bp
Thymine Count
1334285 bp
Guanine Count
1350909 bp
Cytosine Count
1346100 bp
Genome Length
5380485 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
249 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | C9009_19215 | Not Available | Negative | 3944144 - 3945994 | 71189.0 |
| type vi secretion system baseplate subunit tsse | C9009_19220 | Not Available | Negative | 3945998 - 3946411 | 15494.0 |
| type vi secretion system contractile sheath large subunit | C9009_19225 | Not Available | Negative | 3946418 - 3947893 | 55705.0 |
| hypothetical protein | C9009_19230 | Not Available | Negative | 3947944 - 3948168 | 8411.01 |
| type vi secretion system contractile sheath small subunit | C9009_19235 | Not Available | Negative | 3948203 - 3948703 | 18047.5 |
| hcp family type vi secretion system effector | C9009_19240 | Not Available | Positive | 3949400 - 3949918 | 19256.8 |
| type vi secretion system tip protein vgrg | C9009_19245 | Not Available | Positive | 3950128 - 3952029 | 71445.0 |
| duf1795 domain-containing protein | C9009_19250 | Not Available | Positive | 3952057 - 3952518 | 17334.3 |
| transposase family protein | C9009_19260 | Not Available | Positive | 3954587 - 3954770 | 7191.68 |
| is200/is605 family transposase | C9009_19265 | Not Available | Positive | 3954771 - 3954977 | 8009.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





