Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0159 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1331386 bp
Thymine Count
1334285 bp
Guanine Count
1350909 bp
Cytosine Count
1346100 bp
Genome Length
5380485 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
249 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system endodeoxyribonuclease toxin ralr | C9009_12780 | Not Available | Positive | 2642081 - 2642230 | 5383.39 |
| duf1187 family protein | C9009_12785 | Not Available | Positive | 2642268 - 2642456 | 7045.5 |
| hypothetical protein | C9009_12790 | Not Available | Positive | 2642556 - 2642771 | 8456.25 |
| duf3596 domain-containing protein | C9009_12795 | Not Available | Positive | 2642773 - 2644008 | 47505.6 |
| trna 2-thiocytidine(32) synthetase ttca | C9009_12800 | Not Available | Positive | 2644060 - 2644995 | 35516.9 |
| atp-dependent rna helicase dbpa | C9009_12805 | Not Available | Negative | 2645124 - 2646497 | 49214.7 |
| zinc transporter zntb | C9009_12810 | Not Available | Negative | 2646975 - 2647958 | 36614.3 |
| sensor domain-containing diguanylate cyclase | C9009_12815 | Not Available | Positive | 2648213 - 2649445 | 46483.9 |
| dna endonuclease smra | C9009_12820 | Not Available | Negative | 2649466 - 2650029 | 21563.8 |
| lysr family transcriptional regulator | C9009_12825 | Not Available | Negative | 2650359 - 2651267 | 34075.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





