Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0154 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1291565 bp
Thymine Count
1298986 bp
Guanine Count
1319805 bp
Cytosine Count
1310270 bp
Genome Length
5232938 bp
Protein-coding Genes
4882 genes
Non-Coding Genes
218 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | C9004_21210 | Not Available | Positive | 4370539 - 4371951 | 52362.2 |
| type vi secretion system membrane subunit tssm | C9004_21215 | Not Available | Positive | 4372060 - 4375494 | 130833.0 |
| hypothetical protein | C9004_21220 | Not Available | Positive | 4375505 - 4376857 | 50734.4 |
| hcp family type vi secretion system effector | C9004_21225 | Not Available | Positive | 4376881 - 4377363 | 18000.5 |
| hypothetical protein | C9004_21235 | Not Available | Positive | 4378331 - 4378810 | 18160.9 |
| hypothetical protein | C9004_21240 | Not Available | Negative | 4378947 - 4379732 | 29620.3 |
| Trna-asp | Not Available | Not Available | Positive | 4380063 - 4380139 | Not Available |
| dna polymerase iii subunit epsilon | C9004_21250 | Not Available | Negative | 4380272 - 4381003 | 27101.5 |
| ribonuclease hi | C9004_21255 | Not Available | Positive | 4381068 - 4381535 | 17597.9 |
| sam-dependent methyltransferase | C9004_21260 | Not Available | Negative | 4381532 - 4382254 | 27295.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





