Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1288840 bp
Thymine Count
1290382 bp
Guanine Count
1305376 bp
Cytosine Count
1320035 bp
Genome Length
5221303 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trp operon leader peptide | C9Z93_01520 | Not Available | Negative | 330434 - 330478 | 1723.19 |
| 5'-3' exoribonuclease | C9Z93_01525 | Not Available | Positive | 330616 - 331497 | 32581.8 |
| threonylcarbamoyl-amp synthase | C9Z93_01530 | Not Available | Positive | 331494 - 332114 | 23213.2 |
| 23s rrna pseudouridylate synthase b | C9Z93_01535 | Not Available | Positive | 332215 - 333087 | 32599.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | C9Z93_01540 | Not Available | Negative | 333127 - 333717 | 22014.2 |
| ycik family oxidoreductase | C9Z93_01545 | Not Available | Negative | 333714 - 334472 | 27947.6 |
| protease | C9Z93_01550 | Not Available | Positive | 334692 - 335741 | 39368.7 |
| duf2498 family protein | C9Z93_01555 | Not Available | Negative | 335777 - 336028 | 9386.17 |
| type i dna topoisomerase | C9Z93_01560 | Not Available | Positive | 336408 - 339005 | 97283.0 |
| hth-type transcriptional regulator cysb | C9Z93_01565 | Not Available | Positive | 339215 - 340189 | 36152.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




