Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1288840 bp
Thymine Count
1290382 bp
Guanine Count
1305376 bp
Cytosine Count
1320035 bp
Genome Length
5221303 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system membrane subunit tssm | C9Z93_21840 | Not Available | Positive | 4429824 - 4433258 | 130997.0 |
| hypothetical protein | C9Z93_21845 | Not Available | Positive | 4433269 - 4434621 | 50685.3 |
| hcp family type vi secretion system effector | C9Z93_21850 | Not Available | Positive | 4434645 - 4435127 | 18000.5 |
| hypothetical protein | C9Z93_21855 | Not Available | Positive | 4435171 - 4436085 | 33993.4 |
| hypothetical protein | C9Z93_21860 | Not Available | Positive | 4436095 - 4436574 | 18160.9 |
| hypothetical protein | C9Z93_21865 | Not Available | Negative | 4436711 - 4437496 | 29575.2 |
| Trna-asp | Not Available | Not Available | Positive | 4437828 - 4437904 | Not Available |
| dna polymerase iii subunit epsilon | C9Z93_21875 | Not Available | Negative | 4438037 - 4438768 | 27101.5 |
| ribonuclease hi | C9Z93_21880 | Not Available | Positive | 4438833 - 4439300 | 17570.9 |
| sam-dependent methyltransferase | C9Z93_21885 | Not Available | Negative | 4439297 - 4440019 | 27306.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




