Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1288840 bp
Thymine Count
1290382 bp
Guanine Count
1305376 bp
Cytosine Count
1320035 bp
Genome Length
5221303 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 3 | C9Z93_17895 | Not Available | Negative | 3672502 - 3674328 | 64143.2 |
| formate hydrogenlyase subunit 2 | C9Z93_17900 | Not Available | Negative | 3674325 - 3674936 | 21888.4 |
| formate hydrogenlyase regulatory protein hyca | C9Z93_17905 | Not Available | Negative | 3675061 - 3675522 | 17627.9 |
| hypothetical protein | C9Z93_17910 | Not Available | Negative | 3675610 - 3675828 | 8011.78 |
| protein hypa | C9Z93_17915 | Not Available | Positive | 3675734 - 3676084 | 13168.9 |
| hydrogenase isoenzymes nickel incorporation protein hypb | C9Z93_17920 | Not Available | Positive | 3676088 - 3676960 | 31566.8 |
| hydrogenase assembly protein hypc | C9Z93_17925 | Not Available | Positive | 3676951 - 3677223 | 9732.58 |
| hydrogenase formation protein hypd | C9Z93_17930 | Not Available | Positive | 3677223 - 3678344 | 41366.7 |
| hydrogenase expression/formation protein hype | C9Z93_17935 | Not Available | Positive | 3678341 - 3679351 | 35110.6 |
| formate hydrogenlyase transcriptional activator flha | C9Z93_17940 | Not Available | Positive | 3679425 - 3681503 | 78512.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




