Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1288840 bp
Thymine Count
1290382 bp
Guanine Count
1305376 bp
Cytosine Count
1320035 bp
Genome Length
5221303 bp
Protein-coding Genes
4863 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | C9Z93_04225 | Not Available | Positive | 879122 - 879454 | 11887.9 |
| protein translocase subunit secd | C9Z93_04230 | Not Available | Positive | 879482 - 881329 | 66636.3 |
| protein translocase subunit secf | C9Z93_04235 | Not Available | Positive | 881340 - 882311 | 35384.6 |
| hnh nuclease family protein | C9Z93_04240 | Not Available | Positive | 882440 - 882787 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | C9Z93_04245 | Not Available | Negative | 882964 - 883848 | 33590.6 |
| duf3251 domain-containing protein | C9Z93_04250 | Not Available | Negative | 884147 - 884686 | 19560.6 |
| transcriptional regulator nrdr | C9Z93_04255 | Not Available | Positive | 884837 - 885286 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9Z93_04260 | Not Available | Positive | 885290 - 886393 | 40429.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | C9Z93_04265 | Not Available | Positive | 886482 - 886952 | 16157.4 |
| transcription antitermination factor nusb | C9Z93_04270 | Not Available | Positive | 886972 - 887391 | 15689.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




