Escherichia coli strain FWSEC0141

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0141 is a Gram-negative, rod-shaped bacterium classified as a facultative anaerobe, capable of thriving in both aerobic and anaerobic environments. This strain typically exists in pairs or singles and is characterized by the presence of flagella, which contributes to its mobility. The optimal growth temperature for FWSEC0141 is 37°C, placing it within the mesophilic temperature range. FWSEC0141 has a diverse range of hosts, including Homo sapiens, various livestock such as Bos taurus and Gallus gallus, and other vertebrates like Canis lupus familiaris and Felis catus. Additionally, it can be found in association with plants like Solanum lycopersicum and Brassica oleracea var. italica, indicating a broad ecological niche that extends beyond animal hosts to include certain plant species. This strain is associated with numerous health effects, particularly in humans, where it can cause urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as hemolytic uremic syndrome (HUS) and neonatal meningitis. The extensive list of health-related impacts highlights the pathogenicity of FWSEC0141 in humans, emphasizing its role as a significant opportunistic pathogen. The presence of FWSEC0141 in various hosts and environments suggests a complex biotic relationship, indicating its adaptability and potential for transmission across species. Understanding the ecological interactions and pathogenic potential of this strain is essential for public health and food safety, particularly given its association with serious health conditions and foodborne infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0141

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0141
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0141 plasmid unnamed4

Gene Summary

Adenine Count

1367821 bp

Thymine Count

1365101 bp

Guanine Count

1383490 bp

Cytosine Count

1381450 bp

Genome Length

5513464 bp

Protein-coding Genes

5195 genes

Non-Coding Genes

317 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
secretion protein espdC9Z91_00860Not AvailablePositive182188 - 18333039621.0
eaebC9Z91_00865Not AvailablePositive183351 - 18429533221.9
type iii secretion system lee chaperone cesd2C9Z91_00870Not AvailablePositive184302 - 18470915762.7
type iii secretion system lee needle major subunit escfC9Z91_00875Not AvailablePositive184746 - 1849678127.69
escg/yscg/ssah family type iii secretion system needle protein co-chaperoneC9Z91_00880Not AvailablePositive184973 - 18525110437.7
secretion protein espfC9Z91_00885Not AvailablePositive185467 - 18609021193.0
lymphostatin efa1/lifaC9Z91_00895Not AvailableNegative187025 - 196696365693.0
Ncrna_class:otherNot AvailableNot AvailablePositive196768 - 196893Not Available
t3ss effector protein nleeC9Z91_00905Not AvailableNegative198574 - 19924826059.2
type iii secretion system effector arginine glycosyltransferase nlebC9Z91_00910Not AvailableNegative199297 - 20028637642.6

Displaying genes 441 – 450 of 5517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total