Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0136 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316562 bp
Thymine Count
1317781 bp
Guanine Count
1340136 bp
Cytosine Count
1353497 bp
Genome Length
5340491 bp
Protein-coding Genes
5067 genes
Non-Coding Genes
254 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | C9Z86_21175 | Not Available | Negative | 4327341 - 4329191 | 71190.0 |
| type vi secretion system baseplate subunit tsse | C9Z86_21180 | Not Available | Negative | 4329195 - 4329608 | 15494.0 |
| type vi secretion system contractile sheath large subunit | C9Z86_21185 | Not Available | Negative | 4329615 - 4331090 | 55673.0 |
| hypothetical protein | C9Z86_21190 | Not Available | Negative | 4331141 - 4331365 | 8483.07 |
| type vi secretion system contractile sheath small subunit | C9Z86_21195 | Not Available | Negative | 4331400 - 4331900 | 18047.5 |
| hcp family type vi secretion system effector | C9Z86_21200 | Not Available | Positive | 4332597 - 4333115 | 19256.8 |
| type vi secretion system tip protein vgrg | C9Z86_21205 | Not Available | Positive | 4333325 - 4335466 | 79794.1 |
| rhs repeat protein | C9Z86_21210 | Not Available | Positive | 4335542 - 4339774 | 157083.0 |
| hypothetical protein | C9Z86_21215 | Not Available | Positive | 4339786 - 4339971 | 6973.41 |
| hypothetical protein | C9Z86_21220 | Not Available | Positive | 4339971 - 4340180 | 8290.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





