Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0136 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316562 bp
Thymine Count
1317781 bp
Guanine Count
1340136 bp
Cytosine Count
1353497 bp
Genome Length
5340491 bp
Protein-coding Genes
5067 genes
Non-Coding Genes
254 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esci/ysci/hrpb family type iii secretion system inner rod protein | C9Z86_20490 | Not Available | Negative | 4193335 - 4193712 | 13383.9 |
| type iii secretion system protein sepz | C9Z86_20495 | Not Available | Negative | 4193796 - 4194092 | 9544.63 |
| type iii secretion system lee chaperone cesl | C9Z86_20500 | Not Available | Positive | 4194276 - 4194629 | 13910.8 |
| type iii secretion system lee export apparatus protein escv | C9Z86_20505 | Not Available | Positive | 4194626 - 4196653 | 75126.6 |
| type iii secretion system lee atpase escn | C9Z86_20510 | Not Available | Positive | 4196637 - 4197977 | 48928.3 |
| type iii secretion protein | C9Z86_20515 | Not Available | Positive | 4198037 - 4198357 | 12362.7 |
| duf1106 domain-containing protein | C9Z86_20520 | Not Available | Positive | 4198350 - 4198766 | 16348.6 |
| type iii secretion system protein sepq | C9Z86_20525 | Not Available | Positive | 4198729 - 4199646 | 34971.9 |
| secretion protein esph | C9Z86_20530 | Not Available | Positive | 4199677 - 4200192 | 19508.2 |
| tir chaperone family protein | C9Z86_20535 | Not Available | Negative | 4200411 - 4200770 | 13809.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





