Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0136 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316562 bp
Thymine Count
1317781 bp
Guanine Count
1340136 bp
Cytosine Count
1353497 bp
Genome Length
5340491 bp
Protein-coding Genes
5067 genes
Non-Coding Genes
254 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| melibiose:sodium transporter melb | C9Z86_11945 | Not Available | Negative | 2479926 - 2481347 | 52627.5 |
| alpha-glucosidase/alpha-galactosidase | C9Z86_11950 | Not Available | Negative | 2481450 - 2482805 | 50658.9 |
| melibiose operon regulatory protein | C9Z86_11955 | Not Available | Positive | 2483088 - 2483996 | 34899.9 |
| biodegradative arginine decarboxylase | C9Z86_11960 | Not Available | Positive | 2484195 - 2486462 | 84429.8 |
| transcriptional regulator | C9Z86_11965 | Not Available | Positive | 2486787 - 2487548 | 29022.4 |
| arginine:agmatine antiporter | C9Z86_11970 | Not Available | Positive | 2487685 - 2489022 | 46845.3 |
| phosphoethanolamine transferase epta | C9Z86_11975 | Not Available | Positive | 2489126 - 2490769 | 61598.5 |
| two-component system response regulator basr | C9Z86_11980 | Not Available | Positive | 2490766 - 2491434 | 25002.3 |
| two-component system sensor histidine kinase pmrb | C9Z86_11985 | Not Available | Positive | 2491444 - 2492535 | 40982.7 |
| lpxt activity modulator pmrr | C9Z86_11990 | Not Available | Negative | 2492511 - 2492600 | 3449.23 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





