Escherichia coli strain FWSEC0133

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0133 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is motile and possesses flagella, contributing to its mobility. It is mesophilic, with an optimal growth temperature of 37°C, which aligns with the average body temperature of many hosts, suggesting an adaptation to host-associated environments. FWSEC0133 has a diverse range of hosts, including various mammals such as Homo sapiens, Bos taurus, and Canis lupus familiaris, as well as avian species like Gallus gallus and even invertebrates like Acanthamoeba. This wide host range highlights its ecological versatility and ability to persist in different biological niches. Health effects associated with FWSEC0133 include a variety of serious conditions, primarily affecting the urinary tract, gastrointestinal system, and potentially leading to systemic infections. It has been implicated in urinary tract infections (UTIs), peritonitis, gastrointestinal infections, and neonatal meningitis, among others. The strain's pathogenicity is particularly noted in humans, where it can cause severe outcomes such as hemolytic uremic syndrome (HUS) and renal failure. The presence of FWSEC0133 in multiple hosts suggests a complex biotic relationship, where it may act as a commensal organism in some species while being pathogenic in others. This duality underscores the significance of understanding microbial interactions within host ecosystems, particularly in the context of disease emergence and public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0133

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0133
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0133 plasmid unnamed3

Gene Summary

Adenine Count

1318601 bp

Thymine Count

1323337 bp

Guanine Count

1339172 bp

Cytosine Count

1329904 bp

Genome Length

5327716 bp

Protein-coding Genes

5036 genes

Non-Coding Genes

262 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Duf2560 family proteinC9Z83_03780Not AvailablePositive766288 - 7665309012.78
Terminase small subunitC9Z83_03785Not AvailablePositive766610 - 76703515770.8
Gene 2 proteinC9Z83_03790Not AvailablePositive767032 - 76844453056.1
Portal proteinC9Z83_03795Not AvailablePositive768447 - 77057379635.0
Gene 4 proteinC9Z83_03800Not AvailablePositive770587 - 77147133544.9
Capsid proteinC9Z83_03805Not AvailablePositive771483 - 77275445716.9
Gene 6 proteinC9Z83_03810Not AvailablePositive772797 - 7729826690.79
Gene 7 proteinC9Z83_03815Not AvailablePositive772957 - 77343917740.9
Gene 8 proteinC9Z83_03820Not AvailablePositive773448 - 77486652165.7
Tail accessory proteinC9Z83_03825Not AvailablePositive774866 - 77571430484.5

Displaying genes 11 – 20 of 5301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total