Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0133 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1318601 bp
Thymine Count
1323337 bp
Guanine Count
1339172 bp
Cytosine Count
1329904 bp
Genome Length
5327716 bp
Protein-coding Genes
5036 genes
Non-Coding Genes
262 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane transport permease yhhj | C9Z83_19585 | Not Available | Positive | 4013162 - 4014286 | 41050.2 |
| isas1 family transposase | C9Z83_19590 | Not Available | Negative | 4014451 - 4014566 | 4067.05 |
| hypothetical protein | C9Z83_19595 | Not Available | Negative | 4014713 - 4014955 | 9243.96 |
| copg family transcriptional regulator | C9Z83_19600 | Not Available | Negative | 4015174 - 4015392 | 8408.23 |
| helix-turn-helix domain-containing protein | C9Z83_19605 | Not Available | Negative | 4015997 - 4016287 | 10847.1 |
| type ii toxin-antitoxin system rele/pare family toxin | C9Z83_19610 | Not Available | Negative | 4016288 - 4016599 | 12190.9 |
| alpha/beta hydrolase | C9Z83_19615 | Not Available | Positive | 4016828 - 4017736 | 33608.2 |
| gnat family n-acetyltransferase | C9Z83_19620 | Not Available | Negative | 4017800 - 4018789 | 37096.5 |
| d-tyrosyl-trna(tyr) deacylase | C9Z83_19625 | Not Available | Negative | 4018786 - 4019223 | 15951.0 |
| virulence factor brkb family protein | C9Z83_19630 | Not Available | Negative | 4019220 - 4020092 | 32840.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





