Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1303155 bp
Thymine Count
1299068 bp
Guanine Count
1359803 bp
Cytosine Count
1332197 bp
Genome Length
5300225 bp
Protein-coding Genes
4801 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic serine endoprotease degp | C9Z78_02740 | Not Available | Positive | 588327 - 589751 | 49357.3 |
| cdar family transcriptional regulator | C9Z78_02745 | Not Available | Positive | 589906 - 591063 | 43659.1 |
| duf3461 family protein | C9Z78_02750 | Not Available | Negative | 591178 - 591564 | 15111.0 |
| phosphodiesterase yaei | C9Z78_02755 | Not Available | Negative | 591722 - 592534 | 29967.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C9Z78_02760 | Not Available | Negative | 592587 - 593411 | 29893.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | C9Z78_02765 | Not Available | Negative | 593442 - 596114 | 102420.0 |
| type i methionyl aminopeptidase | C9Z78_02770 | Not Available | Negative | 596176 - 596970 | 29332.5 |
| 30s ribosomal protein s2 | C9Z78_02775 | Not Available | Positive | 597338 - 598063 | 26745.2 |
| elongation factor ts | C9Z78_02780 | Not Available | Positive | 598321 - 599172 | 30424.7 |
| ump kinase | C9Z78_02785 | Not Available | Positive | 599319 - 600044 | 25971.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





