Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1303155 bp
Thymine Count
1299068 bp
Guanine Count
1359803 bp
Cytosine Count
1332197 bp
Genome Length
5300225 bp
Protein-coding Genes
4801 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion protein e | C9Z78_25105 | Not Available | Positive | 5084562 - 5086070 | 56042.2 |
| type ii secretion protein f | C9Z78_25110 | Not Available | Positive | 5086072 - 5087172 | 40999.4 |
| prepilin-type cleavage/methylation domain-containing protein | C9Z78_25115 | Not Available | Positive | 5087246 - 5087782 | 19338.2 |
| lytic transglycosylase | C9Z78_25120 | Not Available | Positive | 5087836 - 5088309 | 17765.6 |
| prepilin peptidase | C9Z78_25125 | Not Available | Positive | 5088328 - 5088963 | 22982.2 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C9Z78_25130 | Not Available | Positive | 5088968 - 5090332 | 48992.6 |
| hypothetical protein | C9Z78_25140 | Not Available | Negative | 5090570 - 5090875 | 11427.8 |
| site-specific integrase | C9Z78_25145 | Not Available | Negative | 5090917 - 5092086 | 44862.5 |
| hypothetical protein | C9Z78_25150 | Not Available | Negative | 5092252 - 5092572 | 12064.6 |
| conjugal transfer protein trae | C9Z78_25155 | Not Available | Positive | 5092832 - 5093653 | 31091.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





