Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1303155 bp
Thymine Count
1299068 bp
Guanine Count
1359803 bp
Cytosine Count
1332197 bp
Genome Length
5300225 bp
Protein-coding Genes
4801 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | C9Z78_23930 | Not Available | Positive | 4896397 - 4897553 | 41566.4 |
| n-acetylmuramoyl-l-alanine amidase | C9Z78_23935 | Not Available | Positive | 4897586 - 4898320 | 28164.4 |
| hypothetical protein | C9Z78_23940 | Not Available | Positive | 4898310 - 4898699 | 15278.3 |
| hypothetical protein | C9Z78_23945 | Not Available | Positive | 4898805 - 4900019 | 44670.9 |
| type vi secretion protein vask | C9Z78_23950 | Not Available | Positive | 4900076 - 4903402 | 124177.0 |
| type vi secretion system protein tssa | C9Z78_23955 | Not Available | Positive | 4903395 - 4905005 | 59914.8 |
| paar domain-containing protein | C9Z78_23960 | Not Available | Positive | 4905011 - 4906417 | 51780.9 |
| type vi secretion system baseplate subunit tssf | C9Z78_23970 | Not Available | Positive | 4907046 - 4908806 | 67298.3 |
| type vi secretion system baseplate subunit tssg | C9Z78_23975 | Not Available | Positive | 4908770 - 4909849 | 39368.6 |
| type vi secretion system lipoprotein tssj | C9Z78_23980 | Not Available | Positive | 4909830 - 4910366 | 20531.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





