Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1303155 bp
Thymine Count
1299068 bp
Guanine Count
1359803 bp
Cytosine Count
1332197 bp
Genome Length
5300225 bp
Protein-coding Genes
4801 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | C9Z78_22575 | Not Available | Negative | 4634848 - 4635342 | 18966.7 |
| impe family protein | C9Z78_22580 | Not Available | Negative | 4635339 - 4636169 | 30696.2 |
| type vi secretion system-associated protein tagk | C9Z78_22585 | Not Available | Negative | 4636156 - 4637070 | 34216.8 |
| type vi secretion system atpase tssh | C9Z78_22590 | Not Available | Positive | 4637403 - 4640036 | 96233.7 |
| peptidoglycan-binding domain-containing protein | C9Z78_22595 | Not Available | Positive | 4640049 - 4640612 | 20087.8 |
| hypothetical protein | C9Z78_22600 | Not Available | Positive | 4640615 - 4640905 | 11177.6 |
| type vi secretion system contractile sheath small subunit | C9Z78_22605 | Not Available | Positive | 4640967 - 4641512 | 19895.9 |
| type vi secretion system contractile sheath large subunit | C9Z78_22610 | Not Available | Positive | 4641555 - 4643051 | 56061.2 |
| hypothetical protein | C9Z78_22615 | Not Available | Positive | 4643102 - 4643509 | 14942.6 |
| hypothetical protein | C9Z78_22620 | Not Available | Positive | 4643522 - 4643974 | 16918.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





