Escherichia coli strain FWSEC0128

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0128 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism and mobility, enabled by the presence of flagella. This strain is mesophilic, with an optimal growth temperature of 37°C, and is typically found in host-associated habitats. Its cell arrangement can be observed in pairs and singles. FWSEC0128 is free-living and has a diverse range of hosts, including various animals such as Homo sapiens, Gallus gallus, Bos taurus, and numerous others, as well as plants like Solanum lycopersicum and Brassica oleracea var. italica. This broad host range indicates its ecological versatility and potential interactions within different ecosystems. The strain is associated with numerous health effects, primarily in humans, including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemorrhagic colitis. These pathogenic effects highlight its role as a significant human pathogen, capable of causing a wide array of diseases, ranging from mild diarrhea to severe systemic infections like septicemia and hemolytic uremic syndrome (HUS). Given its ability to thrive in various hosts and its association with serious health conditions, E. coli strain FWSEC0128 serves as an important reminder of the complexities of host-pathogen interactions. Its presence in both human and animal hosts underscores the need for ongoing surveillance and research to manage and mitigate the risks associated with this strain in clinical and environmental settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0128

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0128
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0128


Gene Summary

Adenine Count

1303155 bp

Thymine Count

1299068 bp

Guanine Count

1359803 bp

Cytosine Count

1332197 bp

Genome Length

5300225 bp

Protein-coding Genes

4801 genes

Non-Coding Genes

347 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphataseC9Z78_00005Not AvailableNegative300 - 87221125.2
methionine import atp-binding protein metnC9Z78_00010Not AvailablePositive1060 - 209137834.7
methionine abc transporterC9Z78_00015Not AvailablePositive2084 - 273723257.6
metq/nlpa family lipoproteinC9Z78_00020Not AvailablePositive2777 - 359229433.3
rcs stress response system protein rcsfC9Z78_00025Not AvailablePositive3710 - 411414182.3
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoC9Z78_00030Not AvailablePositive4111 - 481826362.8
proline--trna ligaseC9Z78_00035Not AvailablePositive4929 - 664763620.3
yaef family permuted papain-like enzymeC9Z78_00040Not AvailablePositive6700 - 752429800.7
envelope stress response activation lipoprotein nlpeC9Z78_00045Not AvailableNegative7554 - 826425871.7
peptidyl-trna hydrolase arfbC9Z78_00050Not AvailableNegative8278 - 870015591.9

Displaying genes 311 – 320 of 5150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total