Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1303155 bp
Thymine Count
1299068 bp
Guanine Count
1359803 bp
Cytosine Count
1332197 bp
Genome Length
5300225 bp
Protein-coding Genes
4801 genes
Non-Coding Genes
347 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanase | C9Z78_13915 | Not Available | Negative | 2879136 - 2880551 | 52776.4 |
| tryptophanase leader peptide | C9Z78_13920 | Not Available | Negative | 2880772 - 2880846 | 2894.56 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C9Z78_13925 | Not Available | Negative | 2881088 - 2882452 | 49233.8 |
| membrane protein insertase yidc | C9Z78_13930 | Not Available | Negative | 2882558 - 2884204 | 61543.5 |
| membrane protein insertion efficiency factor yidd | C9Z78_13935 | Not Available | Negative | 2884207 - 2884464 | 9381.61 |
| ribonuclease p protein component | C9Z78_13940 | Not Available | Negative | 2884428 - 2884787 | 13790.0 |
| 50s ribosomal protein l34 | C9Z78_13945 | Not Available | Negative | 2884804 - 2884944 | 5380.74 |
| hypothetical protein | C9Z78_13950 | Not Available | Negative | 2885174 - 2885254 | 3130.75 |
| chromosomal replication initiator protein dnaa | C9Z78_13955 | Not Available | Positive | 2885551 - 2886954 | 52553.7 |
| dna polymerase iii subunit beta | C9Z78_13960 | Not Available | Positive | 2886959 - 2888059 | 40589.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





