Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0127 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1331005 bp
Thymine Count
1329175 bp
Guanine Count
1351571 bp
Cytosine Count
1345534 bp
Genome Length
5369237 bp
Protein-coding Genes
4831 genes
Non-Coding Genes
579 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparagine permease | C9Z77_23545 | Not Available | Negative | 4673751 - 4675250 | 54235.3 |
| glutathione s-transferase family protein | C9Z77_23550 | Not Available | Positive | 4675517 - 4676134 | 23381.1 |
| hypothetical protein | C9Z77_23555 | Not Available | Positive | 4676210 - 4676422 | 8259.59 |
| type iv secretion protein rhs | C9Z77_23560 | Not Available | Positive | 4677243 - 4677564 | 12192.7 |
| hypothetical protein | C9Z77_23565 | Not Available | Negative | 4677565 - 4678282 | 25344.3 |
| type vi secretion system tip protein vgrg | C9Z77_23570 | Not Available | Negative | 4678358 - 4680499 | 79794.1 |
| hcp family type vi secretion system effector | C9Z77_23575 | Not Available | Negative | 4680709 - 4681227 | 19256.8 |
| type vi secretion system contractile sheath small subunit | C9Z77_23580 | Not Available | Positive | 4681924 - 4682424 | 18047.5 |
| hypothetical protein | C9Z77_23585 | Not Available | Positive | 4682459 - 4682683 | 8483.07 |
| type vi secretion system contractile sheath large subunit | C9Z77_23590 | Not Available | Positive | 4682734 - 4684209 | 55673.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





