Escherichia coli strain FWSEC0127

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0127 is a Gram-negative, rod-shaped bacterium classified as a facultative anaerobe. It exhibits mobility due to the presence of flagella and typically arranges itself in pairs or as single cells. This strain thrives optimally at 37°C and falls within the mesophilic temperature range. FWSEC0127 has a diverse range of known hosts, including various species of mammals, birds, and even plants such as Solanum lycopersicum and Brassica oleracea var. italica. This wide host range indicates its adaptability and ecological versatility, allowing it to inhabit both animal and plant ecosystems. This strain is associated with a number of health effects, particularly in humans. It is known to cause urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis, among other serious health issues. The pathogenicity of FWSEC0127 in humans underscores its role as a significant contributor to both community-acquired and nosocomial infections, including severe conditions like hemolytic uremic syndrome (HUS) and septicemia. Given its free-living biotic relationship and capacity to infect multiple hosts, FWSEC0127 serves as a reminder of the complex interactions between microorganisms and their environments. Its ability to thrive in diverse habitats and cause a wide array of health issues highlights the importance of monitoring and understanding E. coli strains in both clinical and ecological contexts, emphasizing their relevance in public health and microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0127

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0127
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0127 plasmid unnamed4

Gene Summary

Adenine Count

1331005 bp

Thymine Count

1329175 bp

Guanine Count

1351571 bp

Cytosine Count

1345534 bp

Genome Length

5369237 bp

Protein-coding Genes

4831 genes

Non-Coding Genes

579 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate 1-decarboxylaseC9Z77_04870Not AvailableNegative1053653 - 105403313834.5
rpn family recombination-promoting nuclease/putative transposaseC9Z77_04875Not AvailablePositive1054307 - 105520934694.9
pantoate--beta-alanine ligaseC9Z77_04880Not AvailableNegative1055283 - 105613431629.6
3-methyl-2-oxobutanoate hydroxymethyltransferaseC9Z77_04885Not AvailableNegative1056146 - 105694028181.0
fimbrial-like adhesinC9Z77_04890Not AvailableNegative1057053 - 105832746411.3
fimbrial protein stafC9Z77_04895Not AvailableNegative1058380 - 105897621451.7
fimbrial-like protein yadlC9Z77_04900Not AvailableNegative1059003 - 105960520898.7
fimbrial proteinC9Z77_04905Not AvailableNegative1059620 - 106018920292.1
fimbrial chaperoneC9Z77_04915Not AvailableNegative1062842 - 106358226946.1
fimbrial proteinC9Z77_04920Not AvailableNegative1063687 - 106427120118.7

Displaying genes 1561 – 1570 of 5410 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total