Escherichia coli strain FWSEC0125

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0125 is a Gram-negative, rod-shaped bacterium that is classified as a facultative anaerobe, thriving optimally at 37°C within a mesophilic temperature range. This strain exhibits mobility due to the presence of flagella and can occur in pairs or as single cells. FWSEC0125 is characterized by having a single replicon and possesses a double membrane structure. This strain is primarily associated with various hosts, including Homo sapiens, Gallus gallus, and Bos taurus, among others. It demonstrates a free-living biotic relationship, indicating its ability to exist independently in diverse environments. The extensive list of hosts also includes various mammals and other vertebrates, which suggests a broad ecological adaptability. Clinically, FWSEC0125 is linked to numerous health effects, particularly in humans. It is known to cause urinary tract infections (UTIs), peritonitis, and gastrointestinal infections, including severe conditions such as hemorrhagic colitis and hemolytic uremic syndrome (HUS). The strain has implications for neonatal health, being associated with neonatal meningitis and sepsis. The pathogenicity of E. coli strain FWSEC0125 highlights its significant role in human health, particularly through its involvement in various infectious diseases. Its ability to inhabit multiple hosts may facilitate its transmission and persistence in different ecological niches, ultimately influencing public health outcomes and food safety. Understanding the specific traits of this strain can aid in developing targeted interventions to mitigate its health impacts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0125

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0125
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0125 plasmid unnamed5

Gene Summary

Adenine Count

1268068 bp

Thymine Count

1268772 bp

Guanine Count

1299556 bp

Cytosine Count

1291069 bp

Genome Length

5132619 bp

Protein-coding Genes

4517 genes

Non-Coding Genes

448 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
allantoate amidohydrolaseC9Z75_21830Not AvailableNegative4512768 - 451400345602.4
ureidoglycolate dehydrogenaseC9Z75_21835Not AvailableNegative4514025 - 451507437884.2
acyl-coa synthetase fdraC9Z75_21840Not AvailablePositive4515391 - 451705858425.3
duf1116 domain-containing proteinC9Z75_21845Not AvailablePositive4517068 - 451832744932.6
duf2877 domain-containing proteinC9Z75_21850Not AvailablePositive4518338 - 451915329670.9
carbamate kinaseC9Z75_21855Not AvailablePositive4519150 - 452004331678.1
5-(carboxyamino)imidazole ribonucleotide synthaseC9Z75_21860Not AvailableNegative4520170 - 452123739453.3
5-(carboxyamino)imidazole ribonucleotide mutaseC9Z75_21865Not AvailableNegative4521234 - 452174317781.3
udp-2,3-diacylglucosamine diphosphataseC9Z75_21870Not AvailableNegative4521861 - 452258326867.6
peptidylprolyl isomerase bC9Z75_21875Not AvailableNegative4522586 - 452308018168.5

Displaying genes 4431 – 4440 of 4967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total