Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0125 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1268068 bp
Thymine Count
1268772 bp
Guanine Count
1299556 bp
Cytosine Count
1291069 bp
Genome Length
5132619 bp
Protein-coding Genes
4517 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | C9Z75_21280 | Not Available | Positive | 4410370 - 4411854 | 55671.9 |
| type vi secretion system baseplate subunit tsse | C9Z75_21285 | Not Available | Positive | 4411859 - 4412284 | 16088.9 |
| type vi secretion system baseplate subunit tssf | C9Z75_21290 | Not Available | Positive | 4412290 - 4414131 | 70803.6 |
| type vi secretion system baseplate subunit tssg | C9Z75_21295 | Not Available | Positive | 4414095 - 4415144 | 39151.0 |
| type vi secretion system-associated fha domain protein tagh | C9Z75_21300 | Not Available | Positive | 4415149 - 4416441 | 47744.7 |
| type vi secretion system lipoprotein tssj | C9Z75_21305 | Not Available | Positive | 4416438 - 4416962 | 19267.9 |
| type vi secretion system baseplate subunit tssk | C9Z75_21310 | Not Available | Positive | 4416965 - 4418311 | 49863.2 |
| dotu family type iv/vi secretion system protein | C9Z75_21315 | Not Available | Positive | 4418325 - 4419089 | 29403.9 |
| type vi secretion system atpase tssh | C9Z75_21320 | Not Available | Positive | 4419099 - 4421831 | 99569.8 |
| type vi secretion system-associated protein tago | C9Z75_21325 | Not Available | Positive | 4421828 - 4422571 | 26476.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





