Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0125 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1268068 bp
Thymine Count
1268772 bp
Guanine Count
1299556 bp
Cytosine Count
1291069 bp
Genome Length
5132619 bp
Protein-coding Genes
4517 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flii/yscn family atpase | C9Z75_11625 | Not Available | Positive | 2313183 - 2314475 | 47587.5 |
| type iii secretion protein | C9Z75_11630 | Not Available | Positive | 2314465 - 2314923 | 18330.4 |
| effector protein | C9Z75_11640 | Not Available | Positive | 2315207 - 2315776 | 22148.1 |
| yscq/hrcq family type iii secretion apparatus protein | C9Z75_11645 | Not Available | Positive | 2315776 - 2316723 | 36197.4 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | C9Z75_11650 | Not Available | Positive | 2316713 - 2317378 | 24526.4 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | C9Z75_11655 | Not Available | Positive | 2317389 - 2317649 | 9430.85 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | C9Z75_11660 | Not Available | Positive | 2317651 - 2318418 | 28172.7 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | C9Z75_11665 | Not Available | Positive | 2318427 - 2319539 | 43025.9 |
| invasion protein | C9Z75_11670 | Not Available | Negative | 2319610 - 2319903 | 11202.4 |
| luxr family transcriptional regulator | C9Z75_11675 | Not Available | Negative | 2319905 - 2320405 | 19131.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





