Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0124 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1231719 bp
Thymine Count
1238438 bp
Guanine Count
1285393 bp
Cytosine Count
1257336 bp
Genome Length
5023556 bp
Protein-coding Genes
4506 genes
Non-Coding Genes
351 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein lysm | C9Z74_13420 | Not Available | Positive | 2764899 - 2765348 | 16064.0 |
| transcriptional regulator | C9Z74_13425 | Not Available | Negative | 2765349 - 2766011 | 24992.3 |
| gaba permease | C9Z74_13430 | Not Available | Negative | 2766032 - 2767432 | 51083.1 |
| 4-aminobutyrate aminotransferase gabt | C9Z74_13435 | Not Available | Negative | 2767670 - 2768950 | 45777.3 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | C9Z74_13440 | Not Available | Negative | 2768964 - 2770412 | 51723.0 |
| l-2-hydroxyglutarate oxidase | C9Z74_13445 | Not Available | Negative | 2770435 - 2771703 | 46070.6 |
| protein csid | C9Z74_13450 | Not Available | Negative | 2771723 - 2772700 | 37362.5 |
| hypothetical protein | C9Z74_13460 | Not Available | Negative | 2774956 - 2775288 | 12508.9 |
| Trna-met | Not Available | Not Available | Positive | 2775848 - 2775923 | Not Available |
| dna invertase | C9Z74_13475 | Not Available | Positive | 2778412 - 2778621 | 7767.67 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





