Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0124 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1231719 bp
Thymine Count
1238438 bp
Guanine Count
1285393 bp
Cytosine Count
1257336 bp
Genome Length
5023556 bp
Protein-coding Genes
4506 genes
Non-Coding Genes
351 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | C9Z74_12695 | Not Available | Positive | 2629636 - 2631021 | 52158.9 |
| metal-dependent hydrolase | C9Z74_12700 | Not Available | Negative | 2631057 - 2631578 | 19474.5 |
| ribosome-associated protein ybcj | C9Z74_12705 | Not Available | Negative | 2631686 - 2631898 | 7389.95 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | C9Z74_12710 | Not Available | Negative | 2631900 - 2632766 | 30957.5 |
| type 1 fimbrial protein subunit fima | C9Z74_12715 | Not Available | Positive | 2633246 - 2633788 | 18475.5 |
| fimbrial chaperone sfmc | C9Z74_12720 | Not Available | Positive | 2634008 - 2634700 | 25459.1 |
| fimbrial biogenesis outer membrane usher protein | C9Z74_12725 | Not Available | Positive | 2634731 - 2637340 | 96072.7 |
| type 1 fimbrin d-mannose specific adhesin fimh | C9Z74_12730 | Not Available | Positive | 2637353 - 2638360 | 36628.1 |
| fimbriae assembly protein | C9Z74_12735 | Not Available | Positive | 2638371 - 2638886 | 18223.6 |
| fimbriae biosynthesis transcriptional regulator fimz | C9Z74_12740 | Not Available | Negative | 2638889 - 2639521 | 23664.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





