Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0124 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1231719 bp
Thymine Count
1238438 bp
Guanine Count
1285393 bp
Cytosine Count
1257336 bp
Genome Length
5023556 bp
Protein-coding Genes
4506 genes
Non-Coding Genes
351 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | C9Z74_12535 | Not Available | Negative | 2593674 - 2595776 | 77265.0 |
| ynce family protein | C9Z74_12540 | Not Available | Positive | 2596018 - 2597079 | 38615.1 |
| l-asparagine permease | C9Z74_12545 | Not Available | Negative | 2597192 - 2598691 | 54236.3 |
| glutathione s-transferase family protein | C9Z74_12550 | Not Available | Positive | 2598958 - 2599575 | 23322.1 |
| hypothetical protein | C9Z74_12555 | Not Available | Positive | 2599651 - 2599863 | 8270.6 |
| duf4329 domain-containing protein | C9Z74_12560 | Not Available | Positive | 2600683 - 2602566 | 71794.6 |
| hypothetical protein | C9Z74_12565 | Not Available | Positive | 2602606 - 2602974 | 14153.2 |
| hypothetical protein | C9Z74_12575 | Not Available | Positive | 2603665 - 2603925 | 10052.4 |
| trna 2-selenouridine(34) synthase mnmh | C9Z74_12585 | Not Available | Negative | 2605157 - 2606251 | 41113.2 |
| hth-type transcriptional activator alls | C9Z74_12590 | Not Available | Negative | 2606320 - 2607246 | 34513.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





