Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0124 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1231719 bp
Thymine Count
1238438 bp
Guanine Count
1285393 bp
Cytosine Count
1257336 bp
Genome Length
5023556 bp
Protein-coding Genes
4506 genes
Non-Coding Genes
351 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9Z74_09325 | Not Available | Negative | 1959333 - 1959812 | 18118.9 |
| hypothetical protein | C9Z74_09330 | Not Available | Negative | 1959822 - 1960736 | 33977.4 |
| hcp family type vi secretion system effector | C9Z74_09335 | Not Available | Negative | 1960780 - 1961262 | 18000.5 |
| hypothetical protein | C9Z74_09340 | Not Available | Negative | 1961286 - 1962638 | 50735.4 |
| type vi secretion system membrane subunit tssm | C9Z74_09345 | Not Available | Negative | 1962649 - 1966083 | 130921.0 |
| type vi secretion system-associated protein tago | C9Z74_09350 | Not Available | Negative | 1966192 - 1966971 | 28571.3 |
| rhs repeat protein | C9Z74_09365 | Not Available | Positive | 1969577 - 1971166 | 58295.8 |
| hypothetical protein | C9Z74_09370 | Not Available | Positive | 1971166 - 1971543 | 14067.7 |
| isas1 family transposase | C9Z74_09375 | Not Available | Positive | 1972012 - 1973148 | 43223.0 |
| hydrolase yafv | C9Z74_09380 | Not Available | Negative | 1973189 - 1973959 | 28926.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





