Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0124 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1231719 bp
Thymine Count
1238438 bp
Guanine Count
1285393 bp
Cytosine Count
1257336 bp
Genome Length
5023556 bp
Protein-coding Genes
4506 genes
Non-Coding Genes
351 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate dehydrogenase | C9Z74_07885 | Not Available | Positive | 1664005 - 1665720 | 64615.9 |
| d-alanyl-d-alanine endopeptidase | C9Z74_07890 | Not Available | Negative | 1665758 - 1666690 | 33889.4 |
| yip1 family protein | C9Z74_07895 | Not Available | Negative | 1666864 - 1667451 | 21692.0 |
| deda family protein | C9Z74_07900 | Not Available | Positive | 1667621 - 1668199 | 21445.9 |
| sdr family oxidoreductase | C9Z74_07905 | Not Available | Negative | 1668329 - 1669090 | 26952.4 |
| multidrug resistance outer membrane protein mdtq | C9Z74_07910 | Not Available | Negative | 1669143 - 1670669 | 55608.2 |
| protein yohp | C9Z74_07915 | Not Available | Positive | 1670803 - 1670886 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | C9Z74_07920 | Not Available | Negative | 1671259 - 1672206 | 35201.5 |
| hypothetical protein | C9Z74_07925 | Not Available | Positive | 1672445 - 1672843 | 14579.6 |
| cidb/lrgb family autolysis modulator | C9Z74_07930 | Not Available | Positive | 1672840 - 1673535 | 24471.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





